Stem-loop cfa-mir-128-2

Accession

MI0008057

Description

Canis lupus familiaris cfa-mir-128-2 precursor miRNA

Sequence

5894917 reads, 8377.0 reads per million, 82 experiments

GGGGGCCGAUACACUGUACGAGAgugaguagcaggucUCACAGUGAACCGGUCUCUUU
((((((((...((((((..((((.(........).))))))))))...))))))))..

Structure

--        AUA      AC    g gag 
  GGGGGCCG   CACUGU  GAGA u   u
  ||||||||   ||||||  |||| |    
  UCUCUGGC   GUGACA  CUcu g   a
UU        CAA      --    g acg 

Annotation confidence High

Genome context

23: 6106256-6106313 [+]

Mature cfa-miR-128-2-5p

• Accession: MIMAT0051745
• Description: Canis lupus familiaris cfa-miR-128-2-5p mature miRNA
• Sequence: 1 - GGGGGCCGAUACACUGUACGAGA - 23
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-128-3p

• Accession: MIMAT0006633
• Description: Canis lupus familiaris cfa-miR-128-3p mature miRNA
• Sequence: 38 - UCACAGUGAACCGGUCUCUUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415