Stem-loop cfa-mir-199-1

Accession

MI0008042

Description

Canis familiaris cfa-mir-199-1 precursor miRNA

Sequence

ccaguguucagacuaccuguucagggggcucugaauguguACAGUAGUCUGCACAUUGGUU
(((((((.((((((((.((((((((....)))))......))))))))))).)))))))..

Structure

--       u        c   ------     g 
  ccagugu cagacuac ugu      ucagg g
  ||||||| |||||||| |||      |||||  
  GGUUACA GUCUGAUG ACA      agucu g
UU       C        -   ugugua     c 

Annotation confidence Not enough data

Genome context

chr20: 50410924-50410984 [+]

Mature cfa-miR-199

• Accession: MIMAT0006642
• Description: Canis familiaris cfa-miR-199 mature miRNA
• Sequence: 41 - ACAGUAGUCUGCACAUUGGUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415