Stem-loop cfa-mir-128-1

Accession

MI0008032

Description

Canis lupus familiaris cfa-mir-128-1 precursor miRNA

Sequence

5914788 reads, 8294.0 reads per million, 82 experiments

CGGGGCCGUAGCACUGUCUGAGAgguuuacauuucUCACAGUGAACCGGUCUCUUU
.(((((((...((((((..(((((((....)))))))))))))...)))))))...

Structure

--C       UAG      CU       u 
   GGGGCCG   CACUGU  GAGAggu u
   |||||||   ||||||  |||||||  
   CUCUGGC   GUGACA  CUcuuua a
UUU       CAA      --       c 

Annotation confidence High

Genome context

19: 39881919-39881974 [+]

Mature cfa-miR-128-1-5p

• Accession: MIMAT0051744
• Description: Canis lupus familiaris cfa-miR-128-1-5p mature miRNA
• Sequence: 1 - CGGGGCCGUAGCACUGUCUGAGA - 23
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-128-3p

• Accession: MIMAT0006633
• Description: Canis lupus familiaris cfa-miR-128-3p mature miRNA
• Sequence: 36 - UCACAGUGAACCGGUCUCUUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415