Stem-loop mml-mir-550

Accession

MI0007826

Description

Macaca mulatta mml-mir-550 precursor miRNA

Sequence

6 reads, 1 reads per million, 3 experiments

ugaugcuuugcuggcuggugcAGUGCCUGAGGGGGUAAGAGCCCuguuguuguaagauaguguCUUACUCCCUCAGGCACAUCuccagcaagu
.........(((.(((((.(..((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))..).))))).)))

Structure

ugaugcuuu   g     u cA                  G C     gu 
         gcu gcugg g  GUGCCUGAGGGGGUAAGA C Cuguu  u
         ||| ||||| |  |||||||||||||||||| | |||||  g
         uga cgacc C  CACGGACUCCCUCAUUCu g gauag  u
---------   a     u UA                  - u     aa 

Annotation confidence Not enough data

Genome context

chr3: 78421474-78421566 [+]

Mature mml-miR-550-5p

• Accession: MIMAT0006418
• Description: Macaca mulatta mml-miR-550-5p mature miRNA
• Sequence: 22 - AGUGCCUGAGGGGGUAAGAGCCC - 44
• Evidence: experimental ; Illumina [2]

Mature mml-miR-550-3p

• Accession: MIMAT0026897
• Description: Macaca mulatta mml-miR-550-3p mature miRNA
• Sequence: 64 - CUUACUCCCUCAGGCACAUC - 83
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45