miRBase entry: mml-mir-517a

Stem-loop mml-mir-517a


Accession
MI0007787
Description
Macaca mulatta mml-mir-517a precursor miRNA


Sequence

104750 reads, 2887.0 reads per million, 61 experiments
cucaugcagugacCCUCUAGAUGGAAGCACUGUCUGuggucuaaaagaaaagAUCGUGCAUCCUUUUAGAGUGUuaccguuugaga
((((.((.(((((.(((((((.(((.((((.((((....(((...)))..)))).)))).))).))))))).))))).)).)))).

Structure
-    u  a     C       U   A    U    Gugg   a 
 cuca gc gugac CUCUAGA GGA GCAC GUCU    ucu  
 |||| || ||||| ||||||| ||| |||| ||||    ||| a
 gagu ug cauUG GAGAUUU CCU CGUG UAga    aga  
a    u  c     U       U   A    C    --aa   a 


Annotation confidence High
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Genome context
19: 53474112-53474197 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from mml-mir-517a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-517a-5p

Accession MIMAT0061183
Description Macaca mulatta mml-miR-517a-5p mature miRNA
Sequence 14 - CCUCUAGAUGGAAGCACUGUCUG - 36
Evidence experimental
Illumina [1]

Mature mml-miR-517a-3p

Accession MIMAT0006375
Description Macaca mulatta mml-miR-517a-3p mature miRNA
Sequence 53 - AUCGUGCAUCCUUUUAGAGUGU - 74
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8