Stem-loop mml-mir-500a

Accession

MI0007774

Description

Macaca mulatta mml-mir-500a precursor miRNA

Sequence

4735 reads, 64 reads per million, 8 experiments

gcucccccucucUAAUCCUUGCUACCUGGGUGAGAgugcuaucugaaugcaAUGCACCUGGGCAAGGAUUCUGAgagcgagagc
((((.(.(((((.(((((((((...(((((((....(((.........)))...))))))))))))))))..))))).).))))

Structure

    c c     -U         UAC       AGAg   uau 
gcuc c cucuc  AAUCCUUGC   CUGGGUG    ugc   c
|||| | |||||  |||||||||   |||||||    |||   u
cgag g gagAG  UUAGGAACG   GGUCCAC    acg   g
    a c     UC         ---       -GUA   uaa 

Annotation confidence High

Genome context

chrX: 50013494-50013577 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from mml-mir-500a

Mature mml-miR-500a-5p

• Accession: MIMAT0006363
• Description: Macaca mulatta mml-miR-500a-5p mature miRNA
• Sequence: 13 - UAAUCCUUGCUACCUGGGUGAGA - 35
• Evidence: experimental ; Illumina [2]

Mature mml-miR-500a-3p

• Accession: MIMAT0026888
• Description: Macaca mulatta mml-miR-500a-3p mature miRNA
• Sequence: 52 - AUGCACCUGGGCAAGGAUUCUGA - 74
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45