Stem-loop mml-mir-489

Accession

MI0007763

Description

Macaca mulatta mml-mir-489 precursor miRNA

Literature search

1 open access papers mention mml-mir-489
(7 sentences)

Sequence

1073 reads, 8 reads per million, 8 experiments

guggcagcuugguGGUCGUAUGUGUGGCGCCAUUUacuugaaccuuuaggaGUGACAUCACAUAUACGGCAGCuaaacuguuac
(((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))

Structure

       c     G             C C    Ua     a 
guggcag uuggu GUCGUAUGUGUGG G CAUU  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
cauuguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     A             A A    --     u 

Annotation confidence Not enough data

Genome context

chr3: 118803460-118803543 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-489

Mature mml-miR-489-3p

• Accession: MIMAT0006349
• Description: Macaca mulatta mml-miR-489-3p mature miRNA
• Sequence: 52 - GUGACAUCACAUAUACGGCAGC - 73
• Evidence: experimental ; Illumina [2]

Mature mml-miR-489-5p

• Accession: MIMAT0026883
• Description: Macaca mulatta mml-miR-489-5p mature miRNA
• Sequence: 14 - GGUCGUAUGUGUGGCGCCAUUU - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45