Stem-loop mml-mir-449a

Accession

MI0007747

Description

Macaca mulatta mml-mir-449a precursor miRNA

Literature search

5 open access papers mention mml-mir-449a
(15 sentences)

Sequence

45667 reads, 166.0 reads per million, 85 experiments

cugugugugaugagcUGGCAGUGUAUUGUUAGCUGGUUgaauaugugaauggcaUCAGCUAACAUGCAACUGCUGUCUuauugcauauaca
.(((((((((((((.(((((((((((.((((((((((.(..(((....))).))))))))))))))).))))))).)))))))))))))..

Structure

-c             c       -    U          U aa   g 
  ugugugugaugag UGGCAGU GUAU GUUAGCUGGU g  uau u
  ||||||||||||| ||||||| |||| |||||||||| |  |||  
  auauacguuauUC GUCGUCA CGUA CAAUCGACUa c  gua g
ac             U       A    -          - -g   a 

Annotation confidence High

Genome context

6: 53467716-53467806 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-449a

Mature mml-miR-449a-5p

• Accession: MIMAT0006330
• Description: Macaca mulatta mml-miR-449a-5p mature miRNA
• Sequence: 16 - UGGCAGUGUAUUGUUAGCUGGUU - 38
• Evidence: experimental ; Illumina [2]

Mature mml-miR-449a-3p

• Accession: MIMAT0026876
• Description: Macaca mulatta mml-miR-449a-3p mature miRNA
• Sequence: 55 - UCAGCUAACAUGCAACUGCUGUCU - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45