Stem-loop mml-mir-380

Accession

MI0007728

Description

Macaca mulatta mml-mir-380 precursor miRNA

Sequence

2675 reads, 18 reads per million, 8 experiments

aagAUGGUUGACCAUAGAACAUGCGcuaucucugugucgUAUGUAAUAUGGUCCACGUCUU
((((((...(((((((..(((((((.(((....))).)))))))..)))))))..))))))

Structure

      GUU       GA       c   c 
aagAUG   GACCAUA  ACAUGCG uau u
||||||   |||||||  ||||||| |||  
UUCUGC   CUGGUAU  UGUAUgc gug c
      -AC       AA       u   u 

Annotation confidence High

Genome context

chr7: 163360318-163360378 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from mml-mir-380

Mature mml-miR-380-3p

• Accession: MIMAT0006309
• Description: Macaca mulatta mml-miR-380-3p mature miRNA
• Sequence: 40 - UAUGUAAUAUGGUCCACGUCUU - 61
• Evidence: experimental ; Illumina [2]

Mature mml-miR-380-5p

• Accession: MIMAT0026866
• Description: Macaca mulatta mml-miR-380-5p mature miRNA
• Sequence: 4 - AUGGUUGACCAUAGAACAUGCG - 25
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45