Stem-loop mml-mir-342

Accession

MI0007704

Description

Macaca mulatta mml-mir-342 precursor miRNA mir-342

Gene
family

RF00760; mir-342

Literature search

3 open access papers mention mml-mir-342
(26 sentences)

Sequence

45295 reads, 302 reads per million, 8 experiments

gaaacugggcucaaggugAGGGGUGCUAUCUGUGAUUGAgggacaugguuaauggaauugUCUCACACAGAAAUCGCACCCGUcaccuuggccuacuua
.....(((((.((((((((.((((((..((((((..(((((.((((.....)))....).)))))))))))....)))))).)))))))))))))....

Structure

gaaac     u        G      --UA      AU     g ----   g 
     ugggc caaggugA GGGUGC    UCUGUG  UGAgg a    cau g
     ||||| |||||||| ||||||    ||||||  ||||| |    ||| u
     auccg guuccacU CCCACG    AGACAC  ACUCU u    gua u
-auuc     -        G      CUAA      --     g uaag   a 

Annotation confidence High

Genome context

chr7: 162431440-162431538 [+]

Mature mml-miR-342-5p

• Accession: MIMAT0006282
• Description: Macaca mulatta mml-miR-342-5p mature miRNA
• Sequence: 19 - AGGGGUGCUAUCUGUGAUUGA - 39
• Evidence: not_experimental

Mature mml-miR-342-3p

• Accession: MIMAT0006283
• Description: Macaca mulatta mml-miR-342-3p mature miRNA
• Sequence: 61 - UCUCACACAGAAAUCGCACCCGU - 83
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8