Stem-loop mml-mir-197

Accession

MI0007661

Description

Macaca mulatta mml-mir-197 precursor miRNA mir-197

Gene
family

RF00707; mir-197

Sequence

8882 reads, 63 reads per million, 8 experiments

ggcugugcCGGGUAGAGAGGGCAGUGGGAGguaagagcucuucacccUUCACCACCUUCUCCACCCAGCauggcc
((((((((.((((.(((((((..(((((.((((((....))).))).)))))..))))))).)))).))))))))

Structure

        C    A       CA     A   -   a 
ggcugugc GGGU GAGAGGG  GUGGG Ggu aag g
|||||||| |||| |||||||  ||||| ||| |||  
ccgguaCG CCCA CUCUUCC  CACUU cca uuc c
        A    C       AC     c   c   u 

Annotation confidence Not enough data

Genome context

chr1: 110612906-110612980 [+]

Mature mml-miR-197-3p

• Accession: MIMAT0006230
• Description: Macaca mulatta mml-miR-197-3p mature miRNA
• Sequence: 48 - UUCACCACCUUCUCCACCCAGC - 69
• Evidence: experimental ; Illumina [2]

Mature mml-miR-197-5p

• Accession: MIMAT0026841
• Description: Macaca mulatta mml-miR-197-5p mature miRNA
• Sequence: 9 - CGGGUAGAGAGGGCAGUGGGAG - 30
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45