Stem-loop mml-mir-140

Accession

MI0007630

Description

Macaca mulatta mml-mir-140 precursor miRNA mir-140

Gene
family

RF00678; mir-140

Literature search

2 open access papers mention mml-mir-140
(6 sentences)

Sequence

1262662 reads, 9127 reads per million, 8 experiments

ugugucucucucuguguccugcCAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucUACCACAGGGUAGAACCACGGacaggauaccggggcacc
.(((((((.....((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))).))))))).

Structure

u       ucucu        -  A             A       u  c  c 
 gugucuc     guguccug cC GUGGUUUUACCCU UGGUAGg ua gu  
 |||||||     |||||||| || ||||||||||||| ||||||| || || a
 cacgggg     cauaggac GG CACCAAGAUGGGA ACCAUcu gu cg  
c       ----c        a  -             C       u  -  u 

Annotation confidence High

Genome context

chr20: 54375562-54375661 [+]

Mature mml-miR-140-5p

• Accession: MIMAT0006197
• Description: Macaca mulatta mml-miR-140-5p mature miRNA
• Sequence: 23 - CAGUGGUUUUACCCUAUGGUAG - 44
• Evidence: not_experimental

Mature mml-miR-140-3p

• Accession: MIMAT0006198
• Description: Macaca mulatta mml-miR-140-3p mature miRNA
• Sequence: 62 - UACCACAGGGUAGAACCACGG - 82
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8