Stem-loop mml-mir-29c

Accession

MI0007598

Description

Macaca mulatta mml-mir-29c precursor miRNA

Literature search

3 open access papers mention mml-mir-29c
(3 sentences)

Sequence

117180 reads, 800 reads per million, 8 experiments

aucucuuacacaggcugaCCGAUUUCUCCUGGUGUUCAGagucuguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguaggggga
..((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).))))))))..

Structure

au        -  ggc           UCC       C   gucu 
  cucuuaca ca   ugaCCGAUUUC   UGGUGUU AGa    g
  |||||||| ||   |||||||||||   ||||||| |||    u
  ggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu    u
ag        a  ---           UUU       -   guuu 

Annotation confidence Not enough data

Genome context

chr1: 158780300-158780387 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-29c

Mature mml-miR-29c-3p

• Accession: MIMAT0006169
• Description: Macaca mulatta mml-miR-29c-3p mature miRNA
• Sequence: 54 - UAGCACCAUUUGAAAUCGGUUA - 75
• Evidence: experimental ; Illumina [2]

Mature mml-miR-29c-5p

• Accession: MIMAT0026804
• Description: Macaca mulatta mml-miR-29c-5p mature miRNA
• Sequence: 19 - CCGAUUUCUCCUGGUGUUCAG - 39
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45