miRBase entry: mml-mir-29b-2

Stem-loop mml-mir-29b-2

Accession

MI0007597

Description

Macaca mulatta mml-mir-29b-2 precursor miRNA

Literature search

5 open access papers mention mml-mir-29b-2
(12 sentences)

Sequence

62216 reads, 400 reads per million, 9 experiments

cuucuggaAGCUGGUUUCACAUGGUGGCUUAGAuuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure

         -          C      G  U    uuuucc 
cuucuggaA GCUGGUUUCA AUGGUG CU AGAu      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    uguuuc

Annotation confidence High

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Genome context

chr1: 158779716-158779796 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-29b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-29b-3p

Accession	MIMAT0006168
Description	Macaca mulatta mml-miR-29b-3p mature miRNA
Sequence	52 - UAGCACCAUUUGAAAUCAGUGUU - 74
Evidence	experimental Illumina [2]
Database links
Predicted targets

Mature mml-miR-29b-2-5p

Accession	MIMAT0031079
Description	Macaca mulatta mml-miR-29b-2-5p mature miRNA
Sequence	9 - AGCUGGUUUCACAUGGUGGCUUAGA - 33
Evidence	experimental Illumina [2]

References

PubMed ID: 18186931
Identification of novel homologous microRNA genes in the rhesus macaque genome
Yue J, Sheng Y, Orwig KE
BMC Genomics (2008) 9:8

PubMed ID: 23034410
Birth and expression evolution of mammalian microRNA genes
"Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
"Genome Res (2013) 23:34-45