Stem-loop mml-mir-29b-1

Accession

MI0007596

Description

Macaca mulatta mml-mir-29b-1 precursor miRNA

Literature search

5 open access papers mention mml-mir-29b-1
(12 sentences)

Sequence

57863 reads, 400 reads per million, 8 experiments

cuucaggaAGCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUUcuuggggg
(((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))).

Structure

-         -          U      GU      uuaaa 
 cuucaggaA GCUGGUUUCA AUGGUG  UUAGAu     u
 ||||||||| |||||||||| ||||||  ||||||     a
 gggguucUU UGACUAAAGU UACCAC  GAUcug     g
g         G          U      --      uuagu 

Annotation confidence High

Genome context

chr3: 157003735-157003815 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-29b-1

Mature mml-miR-29b-3p

• Accession: MIMAT0006168
• Description: Macaca mulatta mml-miR-29b-3p mature miRNA
• Sequence: 51 - UAGCACCAUUUGAAAUCAGUGUU - 73
• Evidence: experimental ; Illumina [2]

Mature mml-miR-29b-1-5p

• Accession: MIMAT0026803
• Description: Macaca mulatta mml-miR-29b-1-5p mature miRNA
• Sequence: 9 - AGCUGGUUUCAUAUGGUGGUUUAGA - 33
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45