Stem-loop mml-mir-29b-1

Accession

MI0007596

Description

Macaca mulatta mml-mir-29b-1 precursor miRNA

Literature search

7 open access papers mention mml-mir-29b-1
(15 sentences)

Sequence

517929 reads, 674.0 reads per million, 151 experiments

cuucaggaAGCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUUcuuggggg
(((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))).

Structure

-         -          U      GU      uuaaa 
 cuucaggaA GCUGGUUUCA AUGGUG  UUAGAu     u
 ||||||||| |||||||||| ||||||  ||||||     a
 gggguucUU UGACUAAAGU UACCAC  GAUcug     g
g         G          U      --      uuagu 

Annotation confidence High

Genome context

3: 157198060-157198140 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-29b-1

Mature mml-miR-29b-1-5p

• Accession: MIMAT0026803
• Description: Macaca mulatta mml-miR-29b-1-5p mature miRNA
• Sequence: 9 - AGCUGGUUUCAUAUGGUGGUUUAGA - 33
• Evidence: experimental ; Illumina [2]

Mature mml-miR-29b-3p

• Accession: MIMAT0006168
• Description: Macaca mulatta mml-miR-29b-3p mature miRNA
• Sequence: 51 - UAGCACCAUUUGAAAUCAGUGUU - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45