Stem-loop mml-let-7f-1

Accession

MI0007577

Description

Macaca mulatta mml-let-7f-1 precursor miRNA

Literature search

4 open access papers mention mml-let-7f-1
(7 sentences)

Sequence

4894752 reads, 36722 reads per million, 8 experiments

ucagagUGAGGUAGUAGAUUGUAUAGUUgugggguagugauuuuacccuguucaggagauaaCUAUACAAUCUAUUGCCUUCCCuga
((((.(.((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).)))))

Structure

    a U                       ---------       u 
ucag g GAGGUAGUAGAUUGUAUAGUUgu         gggguag g
|||| | |||||||||||||||||||||||         ||||||| a
aguC C UUCCGUUAUCUAACAUAUCaaua         ucccauu u
    - C                       gaggacuug       u 

Annotation confidence Medium

Genome context

chr15: 44323112-44323198 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-let-7f-1

Mature mml-let-7f-5p

• Accession: MIMAT0006156
• Description: Macaca mulatta mml-let-7f-5p mature miRNA
• Sequence: 7 - UGAGGUAGUAGAUUGUAUAGUU - 28
• Evidence: not_experimental

Mature mml-let-7f-3p

• Accession: MIMAT0026793
• Description: Macaca mulatta mml-let-7f-3p mature miRNA
• Sequence: 63 - CUAUACAAUCUAUUGCCUUCCC - 84
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45