Stem-loop mml-let-7e

Accession

MI0007576

Description

Macaca mulatta mml-let-7e precursor miRNA

Literature search

4 open access papers mention mml-let-7e
(9 sentences)

Sequence

229705 reads, 1667 reads per million, 8 experiments

cccgggcUGAGGUAGGAGGUUGUAUAGUUgaggaggacacccaaggagaucaCUAUACGGCCUCCUAGCUUUCCccagg
((.(((..(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))..))).))

Structure

  c   cU   G                U  -------  a g 
cc ggg  GAG UAGGAGGUUGUAUAGU ga       gg g a
|| |||  ||| |||||||||||||||| ||       || |  
gg ccC  UUC AUCCUCCGGCAUAUCa cu       cc c c
  a   CU   G                -  agaggaa  - a 

Annotation confidence High

Genome context

chr19: 46928012-46928090 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-let-7e

Mature mml-let-7e-5p

• Accession: MIMAT0006155
• Description: Macaca mulatta mml-let-7e-5p mature miRNA
• Sequence: 8 - UGAGGUAGGAGGUUGUAUAGUU - 29
• Evidence: experimental ; Illumina [2]

Mature mml-let-7e-3p

• Accession: MIMAT0026792
• Description: Macaca mulatta mml-let-7e-3p mature miRNA
• Sequence: 53 - CUAUACGGCCUCCUAGCUUUCC - 74
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45