Stem-loop gga-mir-1790

Accession

MI0007533

Description

Gallus gallus gga-mir-1790 precursor miRNA

Literature search

1 open access papers mention gga-mir-1790
(1 sentences)

Sequence

ggcggggcgggaugccgcuggggccgggccucgugccgugcucugcugggccggagaaggCGGGUGAGGGCGGUGGGGGAagggaagcggagcuguuucuucgcu
(((..(((((....)))))...)))...((((..(((((.(((.(((..(((......))).)))))).))))).))))......(((((((......)))))))

Structure

ggcggggcgggaugccgcuggggccggg    gu     g   u   gg   gg 
                            ccuc  gccgu cuc gcu  gcc  a
                            ||||  ||||| ||| |||  |||   
                            GGGG  UGGCG GAG UGG  Cgg  g
--ucgcuucuuugucgaggcgaagggaA    -G     G   -   -G   aa 

Annotation confidence Not enough data

Genome context

chr4: 11628647-11628751 [-]

Mature gga-miR-1790

• Accession: MIMAT0007703
• Description: Gallus gallus gga-miR-1790 mature miRNA
• Sequence: 61 - CGGGUGAGGGCGGUGGGGGA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964