Stem-loop gga-mir-1782

Accession

MI0007525

Description

Gallus gallus gga-mir-1782 precursor miRNA

Literature search

2 open access papers mention gga-mir-1782
(13 sentences)

Sequence

2177 reads, 2.0 reads per million, 174 experiments

uguuagacugccuggauucuagcccuucuccaaaugaauuuuuaauagaaaauaauuaaACAUUCAUUGGAGCAGGGACAggagcccaggucucucuca
((..(((..((((((.((((..((((.((((((.(((((.((((((........)))))).))))))))))).))))..))))..)))))).)))..))

Structure

  uu   cu      -a    ag    u      a     u      aga 
ug  aga  gccugg  uucu  cccu cuccaa ugaau uuuaau   a
||  |||  ||||||  ||||  |||| |||||| ||||| ||||||    
ac  ucu  uggacc  aggA  GGGA GAGGUU ACUUA Aaauua   a
  uc   -c      cg    CA    C      -     C      aua 

Annotation confidence Not enough data

Genome context

2: 68226816-68226914 [+]

Mature gga-miR-1782-3p

• Accession: MIMAT0007694
• Description: Gallus gallus gga-miR-1782-3p mature miRNA
• Sequence: 60 - ACAUUCAUUGGAGCAGGGACA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964