Stem-loop gga-mir-1773

Accession

MI0007516

Description

Gallus gallus gga-mir-1773 precursor miRNA

Literature search

1 open access papers mention gga-mir-1773
(1 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments

caaccucugcuUGGGGGAGGAGGGACCUCUGCUUugccaggugcuuugaGGAGAGGCAUUGUCCCCUGGAcagggaug
....(((((.((((((((.((..(.(((((.(((.((.....))...))).)))))).)).)))))))).)))))...

Structure

caac     c        G  GG A     G   --u  c 
    cucug uUGGGGGA GA  G CCUCU CUU   gc a
    ||||| |||||||| ||  | ||||| |||   || g
    gggac GGUCCCCU UU  C GGAGA Gag   cg g
-gua     A        G  -A -     G   uuu  u 

Annotation confidence Not enough data

Genome context

chr20: 8317045-8317122 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from gga-mir-1773

Mature gga-miR-1773-5p

• Accession: MIMAT0007683
• Description: Gallus gallus gga-miR-1773-5p mature miRNA
• Sequence: 12 - UGGGGGAGGAGGGACCUCUGCUU - 34
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1773-3p

• Accession: MIMAT0007684
• Description: Gallus gallus gga-miR-1773-3p mature miRNA
• Sequence: 50 - GGAGAGGCAUUGUCCCCUGGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964