Stem-loop gga-mir-1729

Accession

MI0007468

Description

Gallus gallus gga-mir-1729 precursor miRNA mir-1729

Gene
family

RF03359; mir-1729

Literature search

3 open access papers mention gga-mir-1729
(4 sentences)

Sequence

2987 reads, 37 reads per million, 5 experiments

ccugcAUCCCUUACUCACAUGAGUAGUCguaucuauuucagugggaCUACUCGGUGAGUAAGGAUAGCagg
(((((((((.((((((((.(((((((((.(((........))).))))))))))))))))))))).)))))

Structure

     -    C        A         g   cua 
ccugc AUCC UUACUCAC UGAGUAGUC uau   u
||||| |||| |||||||| ||||||||| |||    
ggaCG UAGG AAUGAGUG GCUCAUCag gug   u
     A    -        -         g   acu 

Annotation confidence High

Genome context

chr15: 762734-762804 [+]

Mature gga-miR-1729-5p

• Accession: MIMAT0007629
• Description: Gallus gallus gga-miR-1729-5p mature miRNA
• Sequence: 6 - AUCCCUUACUCACAUGAGUAGUC - 28
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1729-3p

• Accession: MIMAT0007630
• Description: Gallus gallus gga-miR-1729-3p mature miRNA
• Sequence: 47 - CUACUCGGUGAGUAAGGAUAGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964