miRBase entry: gga-mir-1716

Stem-loop gga-mir-1716


Accession
MI0007453
Description
Gallus gallus gga-mir-1716 precursor miRNA


Sequence

1447 reads, 1.0 reads per million, 160 experiments
gcugcauuuccugugccgcagagCGGGGCGGCUGUGAGCUGAGCUgcacggugacggCCCGGCUUCCUGCCGCCCUGGcugcgagcuggaaaccucaaccgcggc
(((((.(((((...(((((((..(((((((((.(.((((((.((((((...)).)))).)))))).).))))))))).))))).)).)))))........)))))

Structure
     -------a     ugu  -     ag         U U      A    -  c 
gcugc        uuucc   gc cgcag  CGGGGCGGC G GAGCUG GCUg ca  
|||||        |||||   || |||||  ||||||||| | |||||| |||| || g
cggcg        aaagg   cg gcguc  GUCCCGCCG C UUCGGC Cggc gu  
     ccaacucc     --u  a     -G         U C      C    a  g 


Annotation confidence Medium
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Genome context
5: 57474612-57474716 [-]

Database links

Mature gga-miR-1716-5p

Accession MIMAT0007613
Description Gallus gallus gga-miR-1716-5p mature miRNA
Sequence 24 - CGGGGCGGCUGUGAGCUGAGCU - 45
Evidence experimental
Illumina [1]

Mature gga-miR-1716-3p

Accession MIMAT0051253
Description Gallus gallus gga-miR-1716-3p mature miRNA
Sequence 58 - CCCGGCUUCCUGCCGCCCUGG - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964