Stem-loop gga-mir-1710

Accession

MI0007447

Description

Gallus gallus gga-mir-1710 precursor miRNA

Literature search

2 open access papers mention gga-mir-1710
(15 sentences)

Sequence

231 reads, 1.0 reads per million, 108 experiments

aaccagcugcaauuUCAUCUGCUGCAUAACCAUCCAguaauuaugCAUGGCUCUGCUGGCAGAGGAauggcagugagguu
((((.(((((.(((((.(((((((((...((((.((.......)).))))...))).))))))))))).)))))..))))

Structure

    -a     a     A      -   UAA    C  gu 
aacc  gcugc auuUC UCUGCU GCA   CCAU CA  a
||||  ||||| ||||| |||||| |||   |||| ||  a
uugg  ugacg uaAGG AGACGG CGU   GGUA gu  u
    ag     g     -      U   CUC    C  au 

Annotation confidence High

Genome context

5: 27398669-27398748 [+]

Mature gga-miR-1710-5p

• Accession: MIMAT0007605
• Description: Gallus gallus gga-miR-1710-5p mature miRNA
• Sequence: 15 - UCAUCUGCUGCAUAACCAUCCA - 36
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1710-3p

• Accession: MIMAT0051252
• Description: Gallus gallus gga-miR-1710-3p mature miRNA
• Sequence: 46 - CAUGGCUCUGCUGGCAGAGGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964