Stem-loop gga-mir-1707

Accession

MI0007442

Description

Gallus gallus gga-mir-1707 precursor miRNA

Sequence

583 reads, 1.0 reads per million, 96 experiments

augcucccucugcgaugcgAGAUGCAGAGCUCGCUGAAAUGCUugaguuuguaauggcUUUGAGCGGGAUCUGUUAUCGUGcauauuugggcucau
(((..(((......(((((.((((((((.((((((.(((.(((............)))))).)))))).)))).)))).)))))....)))..)))

Structure

   cu   ucugcg     A    -    G      G   U   ugagu 
aug  ccc      augcg GAUG CAGA CUCGCU AAA GCU     u
|||  |||      ||||| |||| |||| |||||| ||| |||      
uac  ggg      uacGU CUAU GUCU GGGCGA UUU cgg     u
   uc   --uuua     G    U    A      G   -   uaaug 

Annotation confidence High

Genome context

17: 2499779-2499874 [+]

Mature gga-miR-1707-5p

• Accession: MIMAT0051251
• Description: Gallus gallus gga-miR-1707-5p mature miRNA
• Sequence: 20 - AGAUGCAGAGCUCGCUGAAAUGCU - 43
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1707-3p

• Accession: MIMAT0007599
• Description: Gallus gallus gga-miR-1707-3p mature miRNA
• Sequence: 59 - UUUGAGCGGGAUCUGUUAUCGUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964