Stem-loop gga-mir-1700

Accession

MI0007435

Description

Gallus gallus gga-mir-1700 precursor miRNA

Sequence

121 reads, 0.0 reads per million, 47 experiments

uggaagagcuggaggcacacguuauCCUUUGCUAUGCCUAUGAUGGGugugauuaccucCAUCAGAGGGAUAGGAUGGACagcuggugucagugaaacua
(((....((((...((((..(((.(((..(.((((.(((.(((((((.((....)).))))))).))).)))).).))).)))..))))))))....)))

Structure

   aaga    gag    ac   a   UU G    G   A       u  g 
ugg    gcug   gcac  guu uCC  U CUAU CCU UGAUGGG gu a
|||    ||||   ||||  ||| |||  | |||| ||| ||||||| ||  
auc    ugac   ugug  cga AGG  A GAUA GGA ACUACcu ca u
   aaag    ---    gu   C   -U G    G   G       c  u 

Annotation confidence High

Genome context

1: 136756602-136756701 [+]

Mature gga-miR-1700-5p

• Accession: MIMAT0051250
• Description: Gallus gallus gga-miR-1700-5p mature miRNA
• Sequence: 26 - CCUUUGCUAUGCCUAUGAUGGG - 47
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1700-3p

• Accession: MIMAT0007592
• Description: Gallus gallus gga-miR-1700-3p mature miRNA
• Sequence: 60 - CAUCAGAGGGAUAGGAUGGAC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964