Stem-loop gga-mir-1676

Accession

MI0007410

Description

Gallus gallus gga-mir-1676 precursor miRNA

Sequence

301 reads, 1.0 reads per million, 97 experiments

cgaaggaaugaacucucugggccUGACUCAUCCCCUUUGCUCCUCUcuggcagcaccgAGAGCGAAGUGGGUGGGAAUGUccccggagaugcuucccacg
((..((((..(..((((((((.....(((((((.((((((((.((..((....))..)))))))))).)))))))......)))))))))..))))..))

Structure

  aa    ug ac        -ccUGA       C        C  Uc  g 
cg  ggaa  a  ucucuggg      CUCAUCC CUUUGCUC UC  ug c
||  ||||  |  ||||||||      ||||||| |||||||| ||  ||  
gc  ccuu  u  agaggccc      GGGUGGG GAAGCGAG Ag  ac a
  ac    cg --        cUGUAA       U        -  cc  g 

Annotation confidence High

Genome context

5: 56008532-56008631 [-]

Mature gga-miR-1676-5p

• Accession: MIMAT0007560
• Description: Gallus gallus gga-miR-1676-5p mature miRNA
• Sequence: 24 - UGACUCAUCCCCUUUGCUCCUCU - 46
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1676-3p

• Accession: MIMAT0007561
• Description: Gallus gallus gga-miR-1676-3p mature miRNA
• Sequence: 59 - AGAGCGAAGUGGGUGGGAAUGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964