Stem-loop gga-mir-1673

Accession

MI0007407

Description

Gallus gallus gga-mir-1673 precursor miRNA

Sequence

gagcgugaugugcuggggaucucaugcugugcuucacucucacugcggggccugugaGGUGUGAGUGGAAGUCAGAGGUggaagcccuugauuagaguuu
.((((.....))))(((..((.(((.(((.(((((((((.((((((((...))))..)))).)))).))))))))..)))))..))).............

Structure

gagcgugaugugcu   ga  u   -g   u     -    u    --    g 
              ggg  uc cau  cug gcuuc acuc cacu  gcgg  
              |||  || |||  ||| ||||| |||| ||||  |||| g
              ccc  ag gUG  GAC UGAAG UGAG GUGG  uguc  
-uuugagauuaguu   ga  -   GA   -     G    U    ag    c 

Annotation confidence Not enough data

Genome context

chr15: 749632-749731 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-1673

Mature gga-miR-1673

• Accession: MIMAT0007557
• Description: Gallus gallus gga-miR-1673 mature miRNA
• Sequence: 58 - GGUGUGAGUGGAAGUCAGAGGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964