Stem-loop gga-mir-1654

Accession

MI0007386

Description

Gallus gallus gga-mir-1654 precursor miRNA

Sequence

5 reads, 0 reads per million, 2 experiments

gaugucaguagaaaaaauugaggcUUGCUGGUGGAGGGAGCUGAGcauggcucaaucacuauuaccagcaguagaaguuuugauuuaagggauc
(((.((..((((.((((((...(((.((((((((.((((..(((((...))))).)).)).)))))))))))...))))))..)))).)).)))

Structure

   g  ag    -a      gag   U        A  -  GC     a 
gau uc  uaga  aaaauu   gcU GCUGGUGG GG GA  UGAGc  
||| ||  ||||  ||||||   ||| |||||||| || ||  ||||| u
cua gg  auuu  uuuuga   uga cgaccauu uc cu  acucg  
   g  -a    ag      aga   -        a  a  -a     g 

Annotation confidence Not enough data

Genome context

chr4: 89776512-89776605 [+]

Mature gga-miR-1654

• Accession: MIMAT0007533
• Description: Gallus gallus gga-miR-1654 mature miRNA
• Sequence: 25 - UUGCUGGUGGAGGGAGCUGAG - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964