Stem-loop gga-mir-1650

Accession

MI0007382

Description

Gallus gallus gga-mir-1650 precursor miRNA

Literature search

1 open access papers mention gga-mir-1650
(3 sentences)

Sequence

2 reads, 0 reads per million, 2 experiments

ggaagcucugccaguggcaagcugaaggccagggagcagccacagcagcuaacUCCUCUGAGCUCAGCUUCGCCUCUgccagucucucugucc
(((((..(((.(((.((((((((((..(((((((((.(((.......)))..)))).))).))))))))).))).))).))).)).)))....

Structure

----   -  cu   c   u   -       ag  -   -    -c   ca 
    gga ag  cug cag ggc aagcuga  gc cag ggag  agc  c
    ||| ||  ||| ||| ||| |||||||  || ||| ||||  |||  a
    ucu uc  gac gUC CCG UUCGACU  CG GUC CCUc  ucg  g
ccug   c  -u   c   U   C       --  A   U    aa   ac 

Annotation confidence Not enough data

Genome context

chr2: 22742586-22742678 [-]

Mature gga-miR-1650

• Accession: MIMAT0007528
• Description: Gallus gallus gga-miR-1650 mature miRNA
• Sequence: 54 - UCCUCUGAGCUCAGCUUCGCCUCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964