Stem-loop gga-mir-1648

Accession

MI0007380

Description

Gallus gallus gga-mir-1648 precursor miRNA

Sequence

4 reads, 0 reads per million, 2 experiments

uggccggCGGCUCGGCUCGGCUCCGCUCacaccaggagcagcggcucggcguggUGGGAGUGGAGCGGAGCUGUCcgccguagccg
.(((((((((..((((((.(((((((((.((((((((((....))))..).))))).))))))))).)))))).))))))..))).

Structure

u   --      CU      G         a     - --    a 
 ggc  cggCGG  CGGCUC GCUCCGCUC cacca g  gagc g
 |||  ||||||  |||||| ||||||||| ||||| |  ||||  
 ccg  gccgcC  GUCGAG CGAGGUGAG GUggu c  cucg c
g   au      -U      G         G     g gg    g 

Annotation confidence Not enough data

Genome context

chr20: 14035954-14036039 [+]

Mature gga-miR-1648-5p

• Accession: MIMAT0007524
• Description: Gallus gallus gga-miR-1648-5p mature miRNA
• Sequence: 8 - CGGCUCGGCUCGGCUCCGCUC - 28
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1648-3p

• Accession: MIMAT0007525
• Description: Gallus gallus gga-miR-1648-3p mature miRNA
• Sequence: 55 - UGGGAGUGGAGCGGAGCUGUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964