Stem-loop gga-mir-1627

Accession

MI0007356

Description

Gallus gallus gga-mir-1627 precursor miRNA

Literature search

1 open access papers mention gga-mir-1627
(1 sentences)

Sequence

gucuGAAGUGACAUGUGGUUGAUGGcguuaacucuucuguagcCAGCCACGCUACUGUCACUGGUgagau
((((..(((((((.(((((...((((((((.(......)))))..)))).))))))))))))....))))

Structure

    --GA       U     UGA    --    a uc 
gucu    AGUGACA GUGGU   UGGc  guua c  u
||||    ||||||| |||||   ||||  |||| |   
uaga    UCACUGU CAUCG   ACCG  cgau g  u
    gUGG       -     --C    AC    - uc 

Annotation confidence Not enough data

Genome context

chr4: 39264544-39264613 [+]

Mature gga-miR-1627-5p

• Accession: MIMAT0007497
• Description: Gallus gallus gga-miR-1627-5p mature miRNA
• Sequence: 5 - GAAGUGACAUGUGGUUGAUGG - 25
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1627-3p

• Accession: MIMAT0007498
• Description: Gallus gallus gga-miR-1627-3p mature miRNA
• Sequence: 44 - CAGCCACGCUACUGUCACUGGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964