Stem-loop gga-mir-1619

Accession

MI0007348

Description

Gallus gallus gga-mir-1619 precursor miRNA

Sequence

497 reads, 6.0 reads per million, 111 experiments

uuguaaguccagcagucUGUAUUGCUACAAAUCCUCUUCUcagcguccaaacucagaAGAAUUCAUAGCAAUACGGACUgcuggacuucuag
....(((((((((((((((((((((((..(((..((((((.((........)).)))))))))..)))))))))))))))))))))))....

Structure

uugu                       CA   CC      c  cgu 
    aaguccagcagucUGUAUUGCUA  AAU  UCUUCU ag   c
    |||||||||||||||||||||||  |||  |||||| ||    
    uucaggucgUCAGGCAUAACGAU  UUA  AGAaga uc   c
gauc                       AC   --      c  aaa 

Annotation confidence High

Genome context

20: 12989092-12989183 [-]

Mature gga-miR-1619-5p

• Accession: MIMAT0051239
• Description: Gallus gallus gga-miR-1619-5p mature miRNA
• Sequence: 18 - UGUAUUGCUACAAAUCCUCUUCU - 40
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1619-3p

• Accession: MIMAT0007486
• Description: Gallus gallus gga-miR-1619-3p mature miRNA
• Sequence: 58 - AGAAUUCAUAGCAAUACGGACU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964