miRBase entry: gga-mir-1609

Stem-loop gga-mir-1609


Accession
MI0007336
Description
Gallus gallus gga-mir-1609 precursor miRNA


Sequence

139 reads, 1.0 reads per million, 59 experiments
ugaccugggcagccagugAGGCUGAGGCUGUGCUGGUUGUcuuugugucagguacAAGCUGCGCAGACCCACAGGCacuggcugccuuaaauca
(((...((((((((((((...(((.((((((((.(.(((((((......))).)))).).)))))).))..))).))))))))))))....)))

Structure
   -ccu            AGG   -A  -      U G    -   ug 
uga    gggcagccagug   CUG  GG CUGUGC G UUGU cuu  u
|||    ||||||||||||   |||  || |||||| | |||| |||   
acu    uccgucggucaC   GAC  CC GACGCG C AAca gga  g
   aaau            --G   AC  A      U G    u   cu 


Annotation confidence High
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Genome context
13: 16448868-16448961 [+]

Database links

Mature gga-miR-1609-5p

Accession MIMAT0007475
Description Gallus gallus gga-miR-1609-5p mature miRNA
Sequence 19 - AGGCUGAGGCUGUGCUGGUUGU - 40
Evidence experimental
Illumina [1]

Mature gga-miR-1609-3p

Accession MIMAT0051235
Description Gallus gallus gga-miR-1609-3p mature miRNA
Sequence 56 - AAGCUGCGCAGACCCACAGGC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964