Stem-loop gga-mir-1354

Accession

MI0007311

Description

Gallus gallus gga-mir-1354 precursor miRNA

Literature search

1 open access papers mention gga-mir-1354
(1 sentences)

Sequence

ccugggcugggcCAUGGUGAUGAUGUGCUGAAGcuguggcugggugcacauauagucagaggagcucuguuuuagg
(((((((.(((((....((((.((((((...(((....)))....))))))...))))...).)))).).))))))

Structure

      - u    - AUGG    --G      -UGA   u 
ccuggg c gggc C    UGAU   AUGUGC    AGc g
|||||| | |||| |    ||||   ||||||    |||  
ggauuu g cucg g    acug   uacacg    ucg u
      u u    a -gag    aua      uggg   g 

Annotation confidence Not enough data

Genome context

chr19: 1792020-1792095 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-1354

Mature gga-miR-1354

• Accession: MIMAT0007446
• Description: Gallus gallus gga-miR-1354 mature miRNA
• Sequence: 13 - CAUGGUGAUGAUGUGCUGAAG - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964