Stem-loop gga-mir-1574

Accession

MI0007300

Description

Gallus gallus gga-mir-1574 precursor miRNA

Literature search

1 open access papers mention gga-mir-1574
(4 sentences)

Sequence

cagccaaugcuCUGUGACUUCUCCUUGUCAGAgcugggguauacugACAGGAGGAUGUCAGGAAGCUUcugcug
((((....(((.(.(((((((((((.(((((.((....))...)))))))))))).)))).).)))....))))

Structure

    caau   C G    -       U     --A  u 
cagc    gcu U UGAC UUCUCCU GUCAG   gc g
||||    ||| | |||| ||||||| |||||   ||  
gucg    CGA G ACUG AGGAGGA CAguc   ug g
    ucUU   A G    U       -     aua  g 

Annotation confidence Not enough data

Genome context

chr10: 5628304-5628377 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-1574

Mature gga-miR-1574-5p

• Accession: MIMAT0007434
• Description: Gallus gallus gga-miR-1574-5p mature miRNA
• Sequence: 12 - CUGUGACUUCUCCUUGUCAGA - 32
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1574-3p

• Accession: MIMAT0007435
• Description: Gallus gallus gga-miR-1574-3p mature miRNA
• Sequence: 47 - ACAGGAGGAUGUCAGGAAGCUU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964