Stem-loop gga-mir-1565

Accession

MI0007290

Description

Gallus gallus gga-mir-1565 precursor miRNA

Sequence

gggggcagagccgggcccgggcccgucgcggggggagguccuguuacuccccgaucCGAGGGUCGUGCCUGGUUUUGCUccc
((((((((((((((((...(((((.(((...((((((.........))))))....))))))))..))))))))))))))))

Structure

                ccg     g   -cgg      guc 
gggggcagagccgggc   ggccc ucg    ggggag   c
||||||||||||||||   ||||| |||    ||||||   u
cccUCGUUUUGGUCCG   CUGGG AGC    ccccuc   g
                -UG     -   cuag      auu 

Annotation confidence Not enough data

Genome context

chr28: 3621530-3621611 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from gga-mir-1565

Mature gga-miR-1565

• Accession: MIMAT0007425
• Description: Gallus gallus gga-miR-1565 mature miRNA
• Sequence: 57 - CGAGGGUCGUGCCUGGUUUUGCU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964