Dead hairpin entry

Stem-loop gma-MIR1530

Accession

MI0007249

Description

Glycine max gma-MIR1530 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1530
(9 sentences)

Sequence

1059 reads, 69.0 reads per million, 123 experiments

gcaaaauauaauauuaauauaaguuuuaugugaaaAUAAUUUAAUUUUUUUUaauuuauuauauuuuuauaauuuuauauauuaucuuuuaaaauauaauauauaagaUUAAAUUCUAUUUUCAcauaaauuaaaauauguauguuuau
.........(((((..((((....((((((((((((((((((((((((.....((.(((((((((((.......................))))))))))).))))))))))))..)))))))))))))).....))))..)))))...

Structure

gcaaaauau     ua    -aagu              --          UUUUa  u           uauaauuuua 
         aauau  auau     uuuaugugaaaAUA  AUUUAAUUUU     au uauuauauuuu          u
         |||||  ||||     ||||||||||||||  ||||||||||     || |||||||||||          a
         uugua  uaua     aaauacACUUUUAU  UAAAUUagaa     ua auaauauaaaa          u
------uau     ug    aaauu              CU          -----  u           uuuucuauua