Stem-loop csa-mir-183

Accession

MI0007199

Description

Ciona savignyi csa-mir-183 precursor miRNA

Literature search

1 open access papers mention csa-mir-183
(1 sentences)

Sequence

acaguguugacgaaaUAUGGCACUAGUAGAAAUCACUGuagccaacacccagugguuucacaggugccauaaauuggaaacacuacuuucuacagcgauaaca
..((((((..(((..(((((((((.((.((((((((((...........)))))))))))).)))))))))..)))..))))))...................

Structure

-----------------ac      ga   aa         A  A          uagc 
                   aguguu  cga  UAUGGCACU GU GAAAUCACUG    c
                   ||||||  |||  ||||||||| || ||||||||||    a
                   ucacaa  guu  auaccgugg ca cuuuggugac    a
acaauagcgacaucuuuca      ag   aa         a  -          ccac 

Annotation confidence Not enough data

Genome context

reftig_48: 1818292-1818394 [-]

Mature csa-miR-183

• Accession: MIMAT0006132
• Description: Ciona savignyi csa-miR-183 mature miRNA
• Sequence: 16 - UAUGGCACUAGUAGAAAUCACUG - 38
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080