Stem-loop odi-mir-31

Accession

MI0007142

Description

Oikopleura dioica odi-mir-31 precursor miRNA

Sequence

ugucaauuugcgacgAGGCAAGAUGCUGGCAUUGCUGccagucccgcuaaaugcgcucucggcagcucgacggcauuugcuucaucgcauugauaacgcucg
((((((..(((((.((((((.(((((((.....((((((((...(((.....)))..)).))))))....))))))))))))).))))))))))).......

Structure

-------      uu     c      A       GCAUU      -  ucc   u 
       ugucaa  ugcga gAGGCA GAUGCUG     GCUGcc ag   cgc a
       ||||||  ||||| |||||| |||||||     |||||| ||   ||| a
       auaguu  acgcu cuucgu uuacggc     cgacgg uc   gcg a
gcucgca      --     a      -       -agcu      c  -uc   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-31

• Accession: MIMAT0006079
• Description: Oikopleura dioica odi-miR-31 mature miRNA
• Sequence: 16 - AGGCAAGAUGCUGGCAUUGCUG - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080