Stem-loop odi-mir-1b

Accession

MI0007134

Description

Oikopleura dioica odi-mir-1b precursor miRNA

Sequence

aauaaaagucacggugccuguccacauuuacugacauucuuugccuauuucaaagugcaagggcuUGGAAUGUUAAGAAGUGUGACUagacaagugacucuc
......((((((..((.(((((.((((((..(((((((((..((((..............))))..)))))))))..))))))))).)).)).))))))...

Structure

aauaaa      gg  c  -   c      ac         uu    auuuca 
      agucac  ug cu guc acauuu  ugacauucu  gccu      a
      ||||||  || || ||| ||||||  |||||||||  ||||       
      ucagug  ac ga CAG UGUGAA  AUUGUAAGG  cggg      a
---cuc      -a  a  U   -      GA         Uu    aacgug 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1b

• Accession: MIMAT0006072
• Description: Oikopleura dioica odi-miR-1b mature miRNA
• Sequence: 66 - UGGAAUGUUAAGAAGUGUGACU - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080