Stem-loop odi-mir-1a

Accession

MI0007133

Description

Oikopleura dioica odi-mir-1a precursor miRNA

Sequence

caaaaucagccggaaaucgcgaagccauacuuuuugacauucuuugcugaacuuuuaaaugacgcUGGAAUGUUGAGAAGUGUGAUUuggcgauuuu
............((((((((.(((.((((((((((((((((((..((................)).)))))))))))))))))).))).))))))))

Structure

caaaaucagccg        g   c                  uu  ugaacuu 
            gaaaucgc aag cauacuuuuugacauucu  gc       u
            |||||||| ||| ||||||||||||||||||  ||        
            uuuuagcg uUU GUGUGAAGAGUUGUAAGG  cg       u
------------        g   A                  -U  caguaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1a

• Accession: MIMAT0006071
• Description: Oikopleura dioica odi-miR-1a mature miRNA
• Sequence: 66 - UGGAAUGUUGAGAAGUGUGAUU - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080