Stem-loop csa-mir-1497

Accession

MI0007132

Description

Ciona savignyi csa-mir-1497 precursor miRNA

Literature search

1 open access papers mention csa-mir-1497
(2 sentences)

Sequence

accaucaggcugguauaagcguaaccucuuguaaaucuccaacacuaagcuugguuacagcucugUUGAAGAAUUGCAGGUGGUAGGUgcuauccaugcauua
........(((((.(((.((((.(((.(((((((.(((.(((((...((((.(....))))).))))).))).))))))).)))..)))))))))).))....

Structure

accaucag  -   u   a    -a   u       a   c     cua    u g 
        gc ugg aua gcgu  acc cuuguaa ucu caaca   agcu g u
        || ||| ||| ||||  ||| ||||||| ||| |||||   |||| |  
        cg acc uau cgUG  UGG GGACGUU AGA GUUgu   ucga c u
----auua  u   -   -    GA   U       A   A     --c    - a 

Annotation confidence Not enough data

Genome context

reftig_55: 1053106-1053208 [-]

Mature csa-miR-1497

• Accession: MIMAT0006070
• Description: Ciona savignyi csa-miR-1497 mature miRNA
• Sequence: 66 - UUGAAGAAUUGCAGGUGGUAGGU - 88
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080