miRBase entry: odi-mir-1506

Stem-loop odi-mir-1506


Accession
MI0007128
Description
Oikopleura dioica odi-mir-1506 precursor miRNA


Sequence

uugagaacucgccuuUGGCAGUACCUAAGUCCCUGAgcucuaaaaaugaucagagacuuuucuuacugccucaggcugguaccucaccuucgacgaagcua
.((((.(((.((((..(((((((...(((((.((((..((.......)))))).)))))....)))))))..)))).)))..)))).((((...))))...

Structure
--------------u    -a   c    uU       -CCU     C    gc  ua 
               ugag  acu gccu  GGCAGUA    AAGUC CUGA  uc  a
               ||||  ||| ||||  |||||||    ||||| ||||  ||  a
               acuc  ugg cgga  ccgucau    uucag gacu  ag  a
aucgaagcagcuucc    ca   u    cu       ucuu     a    --  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1506

Accession MIMAT0006066
Description Oikopleura dioica odi-miR-1506 mature miRNA
Sequence 16 - UGGCAGUACCUAAGUCCCUGA - 36
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080