Stem-loop odi-mir-1492

Accession

MI0007104

Description

Oikopleura dioica odi-mir-1492 precursor miRNA

Sequence

cuaauuaugagcagaucaggcaggacgugguuuugugcgaaaccggcgaaaucugaguuugauggUAUUGCACAUACCCGGCCUUGcugaucuugcuuuca
........(((((((((((..(((.((.(((..(((((((.((((.((((.......)))).)))).))))))).))))).)))..)))))).)))))...

Structure

cuaauuau     -      gc   a  u   uu       a    g    au 
        gagca gaucag  agg cg ggu  ugugcga accg cgaa  c
        ||||| ||||||  ||| || |||  ||||||| |||| ||||  u
        uucgu cuaguc  UCC GC CCA  ACACGUU Uggu guuu  g
-----acu     u      GU   G  -   -U       A    a    ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1492

• Accession: MIMAT0006045
• Description: Oikopleura dioica odi-miR-1492 mature miRNA
• Sequence: 66 - UAUUGCACAUACCCGGCCUUG - 86
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080