Stem-loop odi-mir-1490a-2

Accession

MI0007101

Description

Oikopleura dioica odi-mir-1490a-2 precursor miRNA

Sequence

uaucgccagaaaauuAGGCAGUGAGUUGAUAGCGCCCUGAacugcgaauuucaccgucccgggacuaucguuacugucccauuuucuggccgaauauucgac
....((((((((((..((((((((..((((((...((((....(((........)))..)))).))))))))))))))..))))))))))(((....)))..

Structure

--------uauc          uA        GU      CGC    Aacu   aau 
            gccagaaaau  GGCAGUGA  UGAUAG   CCUG    gcg   u
            ||||||||||  ||||||||  ||||||   ||||    |||    
            cggucuuuua  cugucauu  gcuauc   gggc    ugc   u
cagcuuauaagc          cc        --      --a    --cc   cac 

Annotation confidence Low

Genome context

Unknown

Mature odi-miR-1490a

• Accession: MIMAT0006042
• Description: Oikopleura dioica odi-miR-1490a mature miRNA
• Sequence: 16 - AGGCAGUGAGUUGAUAGCGCCCUGA - 40
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080