Stem-loop odi-mir-1478

Accession

MI0007089

Description

Oikopleura dioica odi-mir-1478 precursor miRNA

Sequence

caccaguaccuagcgUGGAACUAGUAUGGAGCAGGCUGAccuuacacaagaaaaagcccucaguccuucaagcuaguaccccuuuagggcuggcacgaucgac
..(((((.(((((.(.((.((((((.(((((..((((((.(((..........)))...))))))))))).)))))).)).).))))))))))..........

Structure

--------ca     a     c U  A      A     CA      --c   acac 
          ccagu ccuag g GG ACUAGU UGGAG  GGCUGA   cuu    a
          ||||| ||||| | || |||||| |||||  ||||||   |||     
          ggucg ggauu c cc ugaucg acuuc  cugacu   gaa    a
cagcuagcac     -     u c  a      a     --      ccc   aaag 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1478

• Accession: MIMAT0006030
• Description: Oikopleura dioica odi-miR-1478 mature miRNA
• Sequence: 16 - UGGAACUAGUAUGGAGCAGGCUGA - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080