miRBase entry: gga-mir-1465

Stem-loop gga-mir-1465


Accession
MI0007070
Description
Gallus gallus gga-mir-1465 precursor miRNA


Sequence

49 reads, 1.0 reads per million, 36 experiments
gcaagguguuaaugaugagccUUUCAGAGGUGCUGGGUGCUUauggcucccacgaaggucacuuagagcuuuguacacuaacacuccuggaaagguucuggcuggcaccc
....(((((((.(.(.(((((((((((.((((..(((.(((...))).)))((((((.((.....)).)))))).......)))).)).)))))))))).).))))))).

Structure
gcaa       a g u         -  A    ----------------------------CU   U   U 
    gguguua u a gagccUUUC AG GGUG                              GGG GCU  
    ||||||| | | ||||||||| || ||||                              ||| ||| a
    ccacggu g u cuuggaaag uc ucac                              ccc cgg  
---c       c g -         g  c    aaucacauguuucgagauucacuggaagca   u   u 


Annotation confidence Not enough data
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Genome context
17: 8776326-8776435 [+]

Database links

Mature gga-miR-1465-5p

Accession MIMAT0007343
Description Gallus gallus gga-miR-1465-5p mature miRNA
Sequence 22 - UUUCAGAGGUGCUGGGUGCUU - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 18430245
    Deep sequencing of chicken microRNAs
    Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
    BMC Genomics (2008) 9:185