Stem-loop gga-mir-1457

Accession

MI0007062

Description

Gallus gallus gga-mir-1457 precursor miRNA

Sequence

28271 reads, 235.0 reads per million, 157 experiments

gcauccacaaccUCCUUGGGCAACCUGUUCCAGUgcgucaccuuuaaauuagauuaucaCACUACAGGCUGCAAAAGGGUUugugag
.....(((((.(.((((..(((.(((((...((((.(....((.......)).....).))))))))).)))..))))).)))))..

Structure

gcauc     c U    GG   A     UCC    c -ucac  uu 
     cacaa c CCUU  GCA CCUGU   AGUg g     cu  a
     ||||| | ||||  ||| |||||   |||| |     ||  a
     guguU G GGAA  CGU GGACA   UCAC c     ga  a
---ga     U -    AA   C     ---    a uauua  uu 

Annotation confidence High

Genome context

2: 136069042-136069128 [-]

Mature gga-miR-1457-5p

• Accession: MIMAT0051225
• Description: Gallus gallus gga-miR-1457-5p mature miRNA
• Sequence: 13 - UCCUUGGGCAACCUGUUCCAGU - 34
• Evidence: experimental ; 454 [1]

Mature gga-miR-1457-3p

• Accession: MIMAT0007335
• Description: Gallus gallus gga-miR-1457-3p mature miRNA
• Sequence: 60 - CACUACAGGCUGCAAAAGGGUU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185