Stem-loop oan-mir-1352

Accession

MI0006751

Description

Ornithorhynchus anatinus oan-mir-1352 precursor miRNA

Sequence

ccggugacguuggacacauUGGAGUGUGACAUUUGUGaucugaauuuucuaaagcuacaguaaggagugucacuguucugcucucuuuuauugccucagauaauuuuucuagaaagcauuucucuaucccucgcaag
....((.((..(((.....(((((.(((((((((.(...(((...............)))..).))))))))).....((((.(((...........(((.......)))))).))))...))))))))..))))..

Structure

ccgg  a  uu   cacau     -----------------------------------------------U         G Gau   aauuuu 
    ug cg  gga     UGGAG                                                GUGACAUUU U   cug      c
    || ||  |||     |||||                                                ||||||||| |   |||      u
    ac gc  ccu     aucuc                                                cacugugag a   gac      a
--ga  -  uc   -----     uuuacgaaagaucuuuuuaauagacuccguuauuuucucucgucuugu         g -au   aucgaa 

Annotation confidence Not enough data

Genome context

Contig19990: 7175-7311 [-]

Mature oan-miR-1352

• Accession: MIMAT0006945
• Description: Ornithorhynchus anatinus oan-miR-1352 mature miRNA
• Sequence: 20 - UGGAGUGUGACAUUUGUG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004