Stem-loop oan-mir-1336

Accession

MI0006682

Description

Ornithorhynchus anatinus oan-mir-1336 precursor miRNA

Sequence

30 reads, 1 reads per million, 2 experiments

guccugucucucccuggcUCUUUCUGCAUCUGAACCUUUUCucugagcuguugaugagaaaaggcugggugggagugagcaggggagaagacgac
....(((((((((((.((((.((((.((((((..(((((((((............))))))))).)))))))))).)))).)))))).)))))..

Structure

gucc     -      g    U    G      AA         ugagc 
    ugucu cucccu gcUC UUCU CAUCUG  CCUUUUCuc     u
    ||||| |||||| |||| |||| ||||||  |||||||||      
    gcaga gagggg cgag gagg gugggu  ggaaaagag     g
--ca     a      a    u    -      -c         uaguu 

Annotation confidence Not enough data

Genome context

4: 4662040-4662134 [+]

Mature oan-miR-1336

• Accession: MIMAT0006829
• Description: Ornithorhynchus anatinus oan-miR-1336 mature miRNA
• Sequence: 19 - UCUUUCUGCAUCUGAACCUUUUC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004